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Introduction:
Knowledge is power -- and in healthcare, that
holds absolutely true. Yet, for an industry that
is under financial stress, increasing complexity
of disease and co-morbidity, and burdened by
capacity constraints -- why has data not been
health care's savvier? Three major challenges have
inhibited this:
- data is not accessible and remains in silos;
- data is not analysed to derive meaningful
clinical insights;
- insight isn't accessible for actioning by
providers or patients to self/joint manage their
condition.
Our consortium of medical professionals, data
scientists, IT-infrastructure experts, machine
learning researchers and legal experts have
designed Enabling Patient Interventions to
liberate, analyse, and action that data in a
trustworthy way. EPI aims to empower patients and
providers through self-management, shared
management, and personalization across the full
health spectrum. To do so, we will build a fuller
picture of the person by linking traditional
eHealth data sets with new sources of data.
Further, we will develop a platform based upon a
secure and trustworthy distributed data
infrastructure, combining data analytics,
including machine learning, and health decision
support algorithms to create new, actionable, and
personalized insights for prevention, management,
and intervention to providers and patients. We
will develop new machine learning methods for
determining and analysing optimal interventions
within small patient groups.
Our insights will be applied in healthcare use
cases representing a spectrum of health management
challenges ranging from common chronic to highly
lethal orphan diseases, and will empower better
self/joint management of these conditions to
improve cost, quality, and outcomes of care.
Here are introductory slides about the project:
in Dutch,
and in English.
This website is reachable under: https://enablingpersonalizedinterventions.nl/
Research topics:
The overall aim of this project is to explore the
use and effectiveness of data driven development
of scientific algorithms, supporting personalized
self- and joint management during medical
interventions / treatments. The key objective is
to use data science promoting health practically
with data from various sources to formulate
lifestyle advice, prevention, diagnostics, and
treatment tailored to the individual, and to
provide personalized, effective, real-time
feedback via a concept referred in this proposal
as a digital health twin. The project addresses
six research questions:
- RQ1/2:
- Dynamically Analyzing
Interventions based on Small Groups:
how can we determine, based on as
little data as possible, whether an
intervention does or does not work
for a small group or even an
individual patient? And how can we
identify effective intervention
strategies and optimize
personalization strategies
applicable for different patient and
lifestyle profiles via dynamic
(on-line) clustering of patients?
- Lead CWI: Rosanne Turner, Peter
Grunwald
- RQ3:
-
- Data and Algorithm Distribution:
what are the consequences of a
distributed, multi-platform,
multi-domain, multi-data-source big
data infrastructure on the machine
learning algorithms and what are
potential consequences on
performance?
- Lead: VU, Corinne Allaart, Henri
Bal
- RQ4:
-
- Adaptive health diagnosis leading
to optimized intervention: how can
we enhance self- / joint management
by dynamically integrating updated
models generated from machine
learning from various data sources
in state of the art health support
systems that based on personal
health records, knowledge of health
modes and effective interventions?
- Lead: UvA, Saba Amiri, Adam
Belloum
- RQ5:
-
- Regulatory constraints and data
governance: how can we create
scalable solutions that meet legal
requirements and consent or medical
necessity-based access to data for
allowed data processing and
preventing breaches of these rules
by embedded compliance, providing
evidence trails and transparency,
thus building trust in a sensitive
big data sharing infrastructure?
- Lead: UvA, Milen Girma Kebede,
Giovanni Sileno, Tom van Engers
- RQ6:
-
- Infrastructure: how can the
various requirements from the
use-cases be implemented using a
single functional ICT-infrastructure
architecture?
- Lead: UvA, Jamila Kassem, Paola
Grosso
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Contact:
References:
- Leon Gommans, John Vollbrecht, Betty Gommans -
de Bruijn, Cees de Laat, "The Service Provider
Group Framework; A framework for arranging trust
and power to facilitate authorization of network
services.", Future Generation Computer Systems,
(Accepted paper), June 2014
- Leon Gommans, "Multi-Domain Authorization for
e-Infrastructures", UvA, Dec 2014.
- Internet2 2012 session: "Trust Framework for
Multi-Domain Authorization".
- speakers: Leon Gommans , John Vollbrecht,
chair: Cees de Laat.
- Managing
Our Hub Economy, Marco Iansiti, Karim R.
Lakhani, Harvard Business review,
September-October 2017 issue, [local
copy]
- NWO
press release: Enabling Personalized
Interventions - EPI.
Outcome:
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2025-01-30
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PhD thesis defense in the
Agnietenkapel of the University of Amsterdam,
promotores prof.dr. Paola Grosso, prof.dr.ir. Cees
de Laat, co-promotor prof.dr. Anwar Osseyran: dr.
Jamila Alsayed Kassem, "Programmable Infrastructures
for Secure Healthcare."
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2024-12-01 |
Allaart, C.*, Amiri, S.*, Bal, H.,
Belloum, A., Gommans, L., Van Halteren, A., &
Klous, S. (2024). Private and Secure Distributed
Deep Learning: A Survey. ACM Computing Surveys,
57(4), 1-43, doi.
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2024-10-01
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Amiri, Saba, Eric Nalisnick, Adam
Belloum, Sander Klous, and Leon Gommans. "Practical
Synthesis of Mixed-Tailed Data with Normalizing
Flows." Transactions on Machine Learning Research,
2024, issn 2835-8856
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2024-03-07 |
EPI Closing Conference
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2024-01-17
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Presentations at the EPI Quarterly
meeting on January 17, 2024. |
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2024-01-01
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B Borsos, CG Allaart, A van Halteren.
Predicting stroke outcome: A case for multimodal
deep learning methods with tabular and CT Perfusion
data. 2024 Artificial Intelligence in Medicine 147,
102719 https://www.sciencedirect.com/science/article/pii/S0933365723002336 |
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2023-11-14
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PhD thesis defense in the
Academiegebouw of Leiden University, promotor
prof.dr. Peter D. Grunwald: dr. Rosanne J. Turner,
"Safe Anytime-Valid Inference: From Theory to
Implementation in Psychiatry Research."
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2023-08-31
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Paper: Yuri van der Does, Rosanne J.
Turner, Miel J.H. Bartels, Karin Hagoort, Aäron
Metselaar, Floortje Scheepers, Peter D. Grünwald,
Metten Somers and Edwin van Dellen. “Outcome
prediction of electroconvulsive therapy for
depression”. Published in Psychiatry Research Volume
326, August 2023, 115328. Link to full text: https://doi.org/10.1016/j.psychres.2023.115328
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2023-05-24
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Paper: Rosanne J Turner, Karin
Hagoort, Rosa J Meijer, Femke Coenen and Floortje E
Scheepers: “Bayesian network analysis of
antidepressant treatment trajectories”. Published in
Scientific reports 2023 May 24;13(1):8428. Link to
full text: https://www.nature.com/articles/s41598-023-35508-7
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2023-04-26
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Paper: accepted for presentation at
AISTATS 2023 and published in proceedings Rosanne J.
Turner and Peter D. Grunwald "Safe Sequential
Testing and Effect Estimation in Stratified Count
Data", gepubliceerd in PMLR 206, 2023. https://proceedings.mlr.press/v206/turner23a/turner23a.pdf
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2023-04-20
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Tutorial by Tim Müller and Adam
Belloum "Introduction to the EPI Framework", at ICT.OPEN 2023 in
Utrecht (NL).
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2022-11-08
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Presentations at the EPI Quarterly
meeting on November 8, 2022.
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2022-10-12
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J. A. Kassem, A. Belloum, T. Müller
and P. Grosso, "Utilisation Profiles of Bridging
Function Chain for Healthcare Use Cases," 2022 IEEE
18th International Conference on e-Science
(e-Science), Salt Lake City, UT, USA, 2022, pp.
475-480, doi: 10.1109/eScience55777.2022.00085.
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2022-10-11
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C. A. Esterhuyse, T. Müller, L. T.
Van Binsbergen and A. S. Z. Belloum, "Exploring the
Enforcement of Private, Dynamic Policies on Medical
Workflow Execution," 2022 IEEE 18th International
Conference on e-Science (e-Science), Salt Lake City,
UT, USA, 2022, pp. 481-486, doi:
10.1109/eScience55777.2022.00086.
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2022-08-17
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Paper: "CG Allaart, B Keyser, H
Bal, A Van Halteren. Vertical Split Learning-an
exploration of predictive performance in medical and
other use cases. 2022 International Joint Conference
on Neural Networks (IJCNN), 1-8", https://ieeexplore.ieee.org/abstract/document/9891964
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2022-06-27
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R.J. Turner "Sequential Tests with
Optional Stopping and Anytime-Valid Effect Size
Estimation for Two-Sample Data Streams using
E-Processes", Presented at the IMS Annual Meeting
2022.
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2022-06-21
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Short paper: R.J. Turner (Rosanne),
P.D. Grünwald (Peter) and A. Härmä (Aki) "Safe
Sequential Conditional Independence Tests for
Discrete Variables" Presented at the OCUPAI'22 -
Online Conference to Unite Philips AI 2022 (June
2022), Online. |
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2022-06-17
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R.J. Turner (Rosanne), F. Coenen
(Femke), F. Roelofs (Femke), K. Hagoort (Karin), A.
Härmä (Aki), P.D. Grünwald (Peter), F.P. Velders
(Fleur) and F.E. Scheepers (Floortje) "Information
extraction from free text for aiding transdiagnostic
psychiatry: constructing NLP pipelines tailored to
clinicians’ needs" BMC Psychiatry, 2022, Volume 22
p. 407.1- 407.11.c
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2022-05-30
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Presentation: R.J. Turner
"Anytime-valid Confidence Intervals for Contingency
Tables and Beyond", Presented at the workshop Save
Anytime-Valid Inference and Game-theoretic
Statistics, 2022. |
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2022-05-25
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Presentation: R.J. Turner and P.D.
Grünwald "Anytime-valid testing and confidence
intervals in contingency tables and beyond",
Presented at the A/B Testing Workshop (May 2022),
Amsterdam, the Netherlands.
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2022-05-11
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Presentation: R.J. Turner
"Netwerkanalyse van antidepressiva
behandeltrajecten", Presented at the NVVP (Dutch
Psychiatry Association) Spring Conference , May
11-13, 2022. |
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2022-04-07
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Presentations and posters ICT.OPEN in
the RAI Amsterdam: Enabling Personalized
Interventions (EPI) Consortium Meeting and
contributions at ICT.Open |
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2022-03-23
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Paper: Rosanne J. Turner and Peter
D. Grunwald "Exact Anytime-valid Confidence
Intervals for Contingency Tables and Beyond" in
Statistics & Probability Letters, 109835. 2023.
https://doi.org/10.1016/j.spl.2023.109835
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2022-03-02
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At SC-Asia in the
Asia Pacific Research Platform (APRP) session
chaired by mr. Yves Poppe (NSCC): "Secure data
sharing in the Responsible Internet.".
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2022-01-17
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Presentations at the EPI Quarterly
meeting on January 17, 2022.
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2022-01-16
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Presentation:
L. Thomas van Binsbergen. at Programming Languages
and the Law ProLaLa 2022. Reflections on the design
and application of eFLINT. Programming Languages and
the Law 2022, [youtube
link].
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2021-11-11
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Interview: "SuperScience: Vertrouwd
gevoelige data kunnen delen en verwerken", interview
door Sjoerd Hartholt, Redacteur AG-Connect van Cees
de Laat, AG-Connect
- 11 Nov 2021 |
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2021-11-01
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Presentation
and Paper:
van Binsbergen, L. T., Kebede, M. G., Baugh, J., van
Engers, T., & van Vuurden, D. G. Dynamic
generation of access control policies from social
policies, The 11th International Conference on
Current and Future Trends of Information and
Communication Technologies in Healthcare (ICTH
2021)November 1-4, 2021, Leuven, Belgium. https://ltvanbinsbergen.nl/files/papers/icth2021.pdf
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2021-09-23
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Presentation
and paper
by Onno Valkering at 17th IEEE eScience 2021,
International Conference ReWorDS21 workshop:
"Brane: A Framework for Programmable Orchestration
of Multi-site Applications."
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2021-09-22
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Presentation
and paper
by Jamila Alsayed Kassem at 17th IEEE eScience 2021,
International Conference: "EPI Framework:
Approach for Traffic Redirection Through
Containerised Network Functions."
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2021-08-27
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Presentation by Thomas van
Binsbergen at Communications of the ACM Europe
Region Special Section Virtual
Workshop (CACM), aug 25 - 26, 2021: "Digital
Data Marketplaces". |
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2021-07-01
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Presentations at the EPI Quarterly
meeting on July 1, 2021.
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2021-06-08
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Paper: Rosanne Turner, Alexander Ly,
Peter Grunwald, "Two-Sample Tests that are Safe
under Optional Stopping, with an Application to
Contingency Tables", Published on arXiv:2106.02693
[stat.ME].
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2021-04-22 |
Presentations at the EPI April 22, 2021: Tiny
Workshop & Consortium Meeting Enabling
Personalized Interventions. |
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2021-02-11 |
Presentation
and abstract
at ICT-Open 2021
Feb 10-11, 2021: Jamila Alsayed Kassem, "EPI
Framework: A dynamic infrastructure to support
health applications." |
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2020-12-10
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Paper: Kebede M.G. (2021) Automating
Normative Control for Healthcare Research. In:
Rodríguez-Doncel V., Palmirani M., Araszkiewicz M.,
Casanovas P., Pagallo U., Sartor G. (eds) AI
Approaches to the Complexity of Legal Systems
XI-XII. AICOL 2020, AICOL 2018, XAILA 2020. Lecture
Notes in Computer Science, vol 13048. Springer,
Cham. https://doi.org/10.1007/978-3-030-89811-3_5
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2020-12-09
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Paper: Kebede M.G., Sileno G., Van Engers T.
(2021) A Critical Reflection on ODRL. In:
Rodríguez-Doncel V., Palmirani M., Araszkiewicz M.,
Casanovas P., Pagallo U., Sartor G. (eds) AI
Approaches to the Complexity of Legal Systems
XI-XII. AICOL 2020, AICOL 2018, XAILA 2020. Lecture
Notes in Computer Science, vol 13048. Springer,
Cham. https://doi.org/10.1007/978-3-030-89811-3_4 |
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2020-11-09
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Short Paper: R.J. Turner and P.D. Grünwald.
"Safe Tests for 2 x 2 Contingency Tables and the
Cochran-Mantel-Haenszel Test" presentation at BNAIC/
BENELEARN 2020. |
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2020-09-24
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Paper: Jamila Alsayed Kassem, Cees de Laat, Arie
Taal, and Paola Grosso, The EPI Framework: A dynamic
data sharing framework for healthcare use
cases", IEEE Acees journal, Digital Object
Identifier DOI 10.1109/ACCESS.2020.3028051 |
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2020-08-09
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Paper: Wouter van Haaften, Alex Sangers, Tom van
Engers, Somayeh Djafari, "Coping with the general
data protection regulation: Anonymization through
multi-party computation technology.", IRIS/SCIS
Conference, 9-12 August 2020, Sundsvall, Sweden,
<https://www.irisscis2020.com>
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2020-06-29
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Rosanne J. Turner, "Safe Statistics for Means and
Proportions", video presentation at the
Machine Learning Summer School 2020 by the Max
Planck Institute for Intelligent Systems, Tübingen,
Germany. Link to the video: https://youtu.be/H5RMtnydAQI
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2020-04-22 |
Presentation at the EPI-PHD online quarterly
meeting: Freek Dijkstra, "Data Exchange Demo: Share
data while retaining control and confidentiality of
your data." |
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2020-04-22 |
Presentation at the EPI-PHD online quarterly
meeting: Guido van 't Noordende, "Push authorization
- the Whitebox model." |
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2020-03-17
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Poster and short
paper at ICT.OPEN
2020 (cancelled): Rosanne J. Turner, Alexander Ly,
Judith ter Schure, Peter D. Grünwald , "Safe
Testing: online, anytime valid hypothesis
tests. " |
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2020-03-17 |
Poster and short
paper at ICT.OPEN
2020 (cancelled): Jamila Alsayed Kassem, "EPI
infrastructure: A dynamic infrastructure to secure
data sharing in healthcare applications." |
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2020-03-17 |
Poster and short
paper at ICT.OPEN
2020 (cancelled): Milen G. Kebede, Giovanni Sileno,
Tom Van Engers, "Automated regulatory constraints
and data governance for healthcare," |
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2019-10-31 |
Poster at NWO COMMIT2DATA PI meeting, Utrecht:
"Enabling Personalized Interventions (EPI)." |
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2019-10-11 |
Presentation by Cees de Laat: Department of
Computer Science, AGH University of Science and
Technology Krakow: "ICT to support the
transformation of Science in the Roaring
Twenties." |
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2019-10-02 |
Poster by Corrine Allaart (VU) at Big Data Health
and Data2Person event, Amersfoort: " Distributed
Deep Learning voor Cerebrovascular Accident." |
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2019-10-02 |
Presentation Pitch by Corinne Allaart (VU) at Big
Data Health and Data2Person event, Amersfoort: "
Distributed Deep Learning voor Cerebrovascular
Accident."
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2019-09-25 |
Presentation by Cees de Laat: eScience
conference Visionary track, San Diego: "ICT
to support the transformation of Science in the
Roaring Twenties." |
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2019-08-22 |
Presentation by Cees de Laat: CIENA executive
briefing invited science presentation, Ottawa: "ICT
to support the transformation of Science in the
Roaring Twenties." |
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2019-09-18 |
Presentation by Cees de Laat: Global Research
Platform (GRP) workshop,
San
Diego: "Globally
Distributed Secure Data Exchange Fabrics."
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2019-04-25 |
Presentation by Cees de Laat, Sander Klous, Josine
Janus at kick off meeting: "Enabling personalized
Intervetions". |
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2018-12-18 |
SURFSARA Superdag 2018 talk: "Digital Data
Markets: Trusted Data Processing in Untrusted
Environments". |
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2018-05-09
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Session organized by Cees de Laat (chair) at
Internet2 Summit, Washington, May 9, 2018; "Digital
Marketplaces Using Novel Infrastructure Models." |
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2017-02-24
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Report from NWO/STW Workshop "ICT with Industry
2016" Lorenz Centre Leiden, Nov. 7-11th 2016; Prof.
dr. Tom M. van Engers (UvA), Prof. dr. Robert Meijer
(UvA, TNO), Dr. ing. Leon Gommans (Air France KLM
Group ICT Technology Office R&D, UvA), Dr. Kees
Nieuwenhuis (Thales Nederland B.V., CTO Office),
"Trusted Big Data Sharing for Aircraft MRO using a
Secure Digital Market Place mechanism." |
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